Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|124943834|gb|EL019989.1|EL019989EST: AGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAG ATGTTTGACGACCAAGACCTCGGCTT
genomic: AGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAGgtaaaaacac ... ggtgttacagATGTTTGACGACCAAGACCTCGGCTT
EST:
gi|164060637|gb|ES033966.1|ES033966EST: GAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAG ATGTTTGACGACCAAGACCTCGGCTTCTTTGCCAATTTTCTGGGGATTTTC
genomic: GAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAGgtaaaaacac ... ggtgttacagATGTTTGACGACCAAGACCTCGGCTTCTTTGCCAATTTTCTGGGGATTTTC
EST:
gi|86025379|gb|DR321132.1|DR321132EST: TAGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAG ATGTTTGACGACCAAGACCTCGGCTTCTTTGCCAATTTTCTGGGGATTTTC
genomic: TAGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAGgtaaaaacac ... ggtgttacagATGTTTGACGACCAAGACCTCGGCTTCTTTGCCAATTTTCTGGGGATTTTC
EST:
gi|124814198|gb|EH899064.1|EH899064EST: TAGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAG ATGTTTGACGACCAAGACCTCGGCTT
genomic: TAGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAGgtaaaaacac ... ggtgttacagATGTTTGACGACCAAGACCTCGGCTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATTCTTCAGTTCTTCTTCTTTTTCGATCTGCTTCGTAGAGTCGATAGAGGGAAGAATCAAAGAAGGAAGTCTGTATCTTTTGAGCTCTCCAAAGgtaaaaacactcagagatttgatttgtttttttcggtctttaccttggatacgtcattctcagatggtagcgaatttgtagatcttaaggcttgaatcta
- - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA