Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|152034024|gb|AU239893.2|AU239893EST: ACAAAAAAGAAGCCGAAGCTAAATTCAAGCAGATCTCTGAAGCTTACGAT GTTTTGAGTGATCCTCAGAAACGAGCAATCTACGAGCAATACGGAGAAGAA
genomic: ACAAAAAAGAAGCCGAAGCTAAATTCAAGCAGATCTCTGAAGCTTACGATgtaattcctt ... tgtgaatcagGTTTTGAGTGATCCTCAGAAACGAGCAATCTACGAGCAATACGGAGAAGAA
EST:
gi|125094151|gb|EL151690.1|EL151690EST: CAAAAAAGAAGCCGAAGCTAAATTCAAGCAGATCTCTGAAGCTTACGAT GTTTTGAGTGATCCTCAGAAACGAGCAATCTACGAGCAATACGGAGAAGAA
genomic: CAAAAAAGAAGCCGAAGCTAAATTCAAGCAGATCTCTGAAGCTTACGATgtaattcctt ... tgtgaatcagGTTTTGAGTGATCCTCAGAAACGAGCAATCTACGAGCAATACGGAGAAGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCTTATCGCAAACTCGCCATGAAATGGCATCCTGATAAGAACCCTAACAACAAAAAAGAAGCCGAAGCTAAATTCAAGCAGATCTCTGAAGCTTACGATgtaattccttccctccttgaccattcccctctttcaatttcactttttcctttttcaaaattcatgcagtttccttgtgaatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC