1 5' 3' |
GCGAGTTCTCTGAGTCGTCCTTCTCAGCCTAGTCGAATCGTTGAGTGTCTCATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAGgttattgtttctccacttttctcttgctttatggatatagaaatggtgtcttcgtagtttattagagtgataagtcttatcctttgttgttctctcgttt...
species | Arabidopsis thaliana |
transcript | AT4G28440.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAG TTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCAEST: gi|47831398|gb|CK121082.1|CK121082
genomic: TCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAGgttattgttt ... gtgtgtatagTTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCA
EST: CATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAG TTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCAAGGATAGEST: gi|86081015|gb|DR376772.1|DR376772
genomic: CATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAGgttattgttt ... gtgtgtatagTTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCAAGGATAG
EST: CATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAG TTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCAAGGATAG
genomic: CATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAGgttattgttt ... gtgtgtatagTTGATCTTATGAAGCCGGGTGCTACGGTGATACTGCGCAATTCAAGGATAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGAGTTCTCTGAGTCGTCCTTCTCAGCCTAGTCGAATCGTTGAGTGTCTCATCGGTGACGAAACTGGGTGTATCCTCTTCACTGCTCGTAACGATCAAGgttattgtttctccacttttctcttgctttatggatatagaaatggtgtcttcgtagtttattagagtgataagtcttatcctttgttgttctctcgttt
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