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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGATCTGGGTTTTGCTTCAACGTGAAACATCTTTGAGGTTGATGATGAGGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAGgtatgataatactctaattattgtttattttgtgttggatcaaatggatgataagaacttgttgatctacttctaaacctcttaattttggagactatgataagagtaaaggacatagtatgtttgaatactgatactgtagtctgtag

Basic information

species Arabidopsis thaliana
transcript AT4G15010.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86070447|gb|DR366204.1|DR366204
EST:     GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAATTCTTCTTGACTTGAG                         TGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
genomic: GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAGgtatgataat ... tagtctgtagTGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
EST: gi|116399032|gb|EG441624.1|EG441624
EST:     GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAG                         TGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
genomic: GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAGgtatgataat ... tagtctgtagTGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
EST: gi|116399034|gb|EG441626.1|EG441626
EST:     GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAG                         TGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
genomic: GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAGgtatgataat ... tagtctgtagTGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
EST: gi|86070446|gb|DR366203.1|DR366203
EST:     GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAATTCTTCTTGACTTGAG                         TGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT
genomic: GGTTTCTGTTTACTTAATATCCTGTGAGAGAAAACTCTTCTTGACTTGAGgtatgataat ... tagtctgtagTGTTGCTGACAAAAACGTATAGGTATATGTACATTTGTTTTCGCTGAGGCT