1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAAACCACCACCCTTCTCTCTCTACTGCCTTTTTACCACAGAGAAGAGAGAGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgatttcgttactctccgatcaatttcttttccggaggaggaacttgttttccgtgcgaaattctgacttgaactttgttgtcaattcatcaaa...
species | Arabidopsis thaliana |
transcript | AT3G48750.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCG GTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTGEST: gi|86036711|gb|DR332466.1|DR332466
genomic: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgat ... caatctacagGTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
EST: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCG GTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTGEST: gi|86036708|gb|DR332461.1|DR332461
genomic: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgat ... caatctacagGTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
EST: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCG GTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTGEST: gi|86036710|gb|DR332465.1|DR332465
genomic: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgat ... caatctacagGTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
EST: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCG GTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTGEST: gi|86036709|gb|DR332462.1|DR332462
genomic: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgat ... caatctacagGTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
EST: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTC-CCG GTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
genomic: AGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgat ... caatctacagGTGACATTTTATAAGTGTGGAGTTTACTTCAGCTTTATTATTCAGGAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAACCACCACCCTTCTCTCTCTACTGCCTTTTTACCACAGAGAAGAGAGAGGATCCGTCGGTGTGCTAGTCTCACTGACACTACATCCGATCGTCGCCGgtaagttgatttcgttactctccgatcaatttcttttccggaggaggaacttgttttccgtgcgaaattctgacttgaactttgttgtcaattcatcaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tactctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttttccg