Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|124706961|gb|EH798363.1|EH798363EST: CTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
genomic: CTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
EST:
gi|47828210|gb|CK117894.1|CK117894EST: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
genomic: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
EST:
gi|125302201|gb|EL316286.1|EL316286EST: CGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
genomic: CGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
EST:
gi|125104721|gb|EL158714.1|EL158714EST: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGG
genomic: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGG
EST:
gi|125256187|gb|EL270272.1|EL270272EST: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGGGGACAACAG
genomic: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGGGGACAACAG
EST:
gi|47832288|gb|CK121972.1|CK121972EST: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTG ACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
genomic: ACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctct ... ctgtccacagACATGATTGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAAGATCTTGCTTTGTATAGAAAGCTTGTTGTTGGATCTGCGTGGCGTAAACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGgtaatcctcttaagctcttatcttctacctattagttttttatcctggcatgctcattgtaacttgtgagatcatatatggttttgaaattggctagttt
- - - - - - - - - - - - - - - - - - - - - - - - - CAGATG