1 5' 3' | 2 5' 3' |
GTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCgtaagtaattctgtgtttacacaacatctcgcaactctatatcatatagtttaaaccattccatcggtagctattaaatccataattcttgtttccaaca...
species | Arabidopsis thaliana |
transcript | AT3G12977.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTC AAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACCEST: gi|116474205|gb|EG516797.1|EG516797
genomic: TGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCgtaagtaatt ... tcattttcagAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACC
EST: TGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTC AAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACC
genomic: TGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCgtaagtaatt ... tcattttcagAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCgtaagtaattctgtgtttacacaacatctcgcaactctatatcatatagtttaaaccattccatcggtagctattaaatccataattcttgtttccaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acacaaca