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GCCCCCAACGAGCGATTCTAGGGTTTCTCTCTGTGTGTTTTGGGTTGCTGAATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgatgatttcgtacacgactgattccactttttttttgttgttgttattgttcagtttttgttctcctgttagaaattgagcaagtagttgaat...
species | Arabidopsis thaliana |
transcript | AT3G05090.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGGEST: gi|116407304|gb|EG449896.1|EG449896
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGGEST: gi|116449111|gb|EG491703.1|EG491703
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGGEST: gi|116407303|gb|EG449895.1|EG449895
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGGEST: gi|116407307|gb|EG449899.1|EG449899
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGGEST: gi|86063685|gb|DR359442.1|DR359442
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
EST: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAG GCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
genomic: AATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgat ... ctcctttcagGCTTTCAGAATAATTTGAAATGCACCGGGTTGGAAGTGCCGGCAGTAATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCCCCAACGAGCGATTCTAGGGTTTCTCTCTGTGTGTTTTGGGTTGCTGAATCACCTTGTTACTATCATCGATTTCATCTGAAGTTGAGATTTTTAAAGgtatgttgatgatttcgtacacgactgattccactttttttttgttgttgttattgttcagtttttgttctcctgttagaaattgagcaagtagttgaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gttctcct