Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|301502066|gb|HO207606.1|HO207606EST: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAG GAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
genomic: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAGgtaaattgag ... tgattttcagGAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
EST:
gi|86054034|gb|DR349791.1|DR349791EST: CGAMSC-TTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAG GAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
genomic: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAGgtaaattgag ... tgattttcagGAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
EST:
gi|86054035|gb|DR349792.1|DR349792EST: CGAAGCCTTGAGATCGATGGAAAAGATTCTAGAAACGTCTTCAAAAAGAG GAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
genomic: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAGgtaaattgag ... tgattttcagGAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
EST:
gi|301502509|gb|HO208049.1|HO208049EST: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAG GAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
genomic: CGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAGgtaaattgag ... tgattttcagGAAAGTATCGGAGAAGAACACAGAGAAAGTTAAGGTTTTTGTTGCAACAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAATGCCATTTTCATGTTGAGCTTCAACCAAGACAAGAACATCCTTAAGCGAAGCCTTGAGATCGATGGAAAAGATTCTAAAAACGTCTTCAAAAAGAGgtaaattgagctaaaagattggttttttgtctctctttcagttccaaactgtgctcatgtgtctgattcctctgtttttttttttggtgattttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA