1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTTTCTTCTCCGGTAGTCGAGCTCGCATCGACTGGACCGATTACAACGCAACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTGgtatgatttcaattgtacaaaggaactagcttttttgctctcaagaacagttagttatttaccaaagtcttatatatatag
species | Arabidopsis thaliana |
transcript | AT2G21070.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTG GTGGATTCCTGATGGACAGCTTTGCCCAACTGTTCCTAATAGATCGAATTAEST: gi|116380279|gb|EG422871.1|EG422871
genomic: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTGgtatgatttc ... atatatatagGTGGATTCCTGATGGACAGCTTTGCCCAACTGTTCCTAATAGATCGAATTA
EST: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTG GTGGATTCCTGATGGACAGCTTTGCCCAACTGTTCCTAATAGATCGAATTAEST: gi|116380274|gb|EG422866.1|EG422866
genomic: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTGgtatgatttc ... atatatatagGTGGATTCCTGATGGACAGCTTTGCCCAACTGTTCCTAATAGATCGAATTA
EST: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTG GTGGATTCCTGATGGACAGCTTTGCCCATCTGTTCCTAATAGA
genomic: ACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTGgtatgatttc ... atatatatagGTGGATTCCTGATGGACAGCTTTGCCCAACTGTTCCTAATAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTCTTCTCCGGTAGTCGAGCTCGCATCGACTGGACCGATTACAACGCAACCCGAGAGCTCACTCGTGTCCTCCTTCTACATGACCATGGCGTCAACTGgtatgatttcaattgtacaaaggaactagcttttttgctctcaagaacagttagttatttaccaaagtcttatatatatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
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