Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86080647|gb|DR376404.1|DR376404EST: AGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTG GGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTC
genomic: AGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactc ... gatggtgcagGGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTC
EST:
gi|116443151|gb|EG485743.1|EG485743EST: AGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTG GGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTC
genomic: AGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactc ... gatggtgcagGGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTC
EST:
gi|125228326|gb|EL242411.1|EL242411EST: CAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTG GGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGA
genomic: CAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactc ... gatggtgcagGGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGA
EST:
gi|125305639|gb|EL319724.1|EL319724EST: GTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTG GGTGCATGGCG
genomic: GTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactc ... gatggtgcagGGTGCATGGCG
EST:
gi|124971996|gb|EL045719.1|EL045719EST: GTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTG GGTGCATGGCGGCATTGGA
genomic: GTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactc ... gatggtgcagGGTGCATGGCGGCATTGGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACCAAGCCAGGTACTACTAAGACGAGCGTGGTTGGTGTATTTGCTGCTGGAGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGgtttgtactctaacttgtattttttacatttctgcacaacgagttagctctttgaaatcatgattggaatctatcatgagtatctaagggtgcttgttga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG