1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCTTACGACAACCTCTCCTGCTCTTCGTTTTCTCTCTACGACGATAAAACCCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcccaatctttattcccagatcttccagatctgaagctcctcttctattttttcgtagatttgatttttaggtttgatctatttgtatgaatg...
species | Arabidopsis thaliana |
transcript | AT1G79930.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAG GTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTGEST: gi|86068010|gb|DR363767.1|DR363767
genomic: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcc ... atctgagaagGTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
EST: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAG GCTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTGEST: gi|86068009|gb|DR363766.1|DR363766
genomic: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcc ... atctgagaagGTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
EST: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAG GTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTGEST: gi|86068008|gb|DR363765.1|DR363765
genomic: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcc ... atctgagaagGTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
EST: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAG GTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTGEST: gi|116479116|gb|EG521708.1|EG521708
genomic: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcc ... atctgagaagGTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
EST: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAG GTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
genomic: CCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcc ... atctgagaagGTTGCTATCAAATACTTGGGAGCCCCCAGTATTATTGAATAACACAGCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTTACGACAACCTCTCCTGCTCTTCGTTTTCTCTCTACGACGATAAAACCCAGATTTGGGTTCAAGCTTCCATAACTTTAAACCCCTCTCGCGATCCAGgtatgtttcccaatctttattcccagatcttccagatctgaagctcctcttctattttttcgtagatttgatttttaggtttgatctatttgtatgaatg
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