Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|152034484|gb|BP830014.2|BP830014EST: TAAAGCTGGAGCTTTAAGTCTCTTTGCCTGTTCTTGGTATCCCATTAGCT ATTACTTTCAGCTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGGTC
genomic: TAAAGCTGGAGCTTTAAGTCTCTTTGC-TGTTCTTGGTATCCCATTAGCTgtaagtacac ... ttatttacagATTACTTTCAG-TACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTC
EST:
gi|124723543|gb|EH814945.1|EH814945EST: TGTTCTTGGTATCCCATTAGCT ATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTCC
genomic: TGTTCTTGGTATCCCATTAGCTgtaagtacac ... ttatttacagATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTCC
EST:
gi|124939401|gb|EL015945.1|EL015945EST: TTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCT ATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCA
genomic: TTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCTgtaagtacac ... ttatttacagATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCA
EST:
gi|125267170|gb|EL281255.1|EL281255EST: TGTTCTTGGTATCCCATTAGCT ATTACTTTCTAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTC
genomic: TGTTCTTGGTATCCCATTAGCTgtaagtacac ... ttatttacagATTACTTTC-AGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTC
EST:
gi|116475885|gb|EG518477.1|EG518477EST: TTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCT ATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTCC
genomic: TTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCTgtaagtacac ... ttatttacagATTACTTTCAGTACTCCTTTTGCTCTAGCATCCATATTCTCAAGCTGCTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGAGGATCACCGGAAAACCGCCGGTGATTTAGCCGGACCGAGCGCTAGTGTTAAAGCTGGAGCTTTAAGTCTCTTTGCTGTTCTTGGTATCCCATTAGCTgtaagtacacttttgtgttgtcttgttaaaaaactttttgctttgcttaaactaacattaatcgattcgttttttattatttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT