Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAACCGGAGACTACCGATATCGAAGCTGTGGTGGTTTCCGATGTTTCGGAGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgttgaatcatacgaaacaacaaattctcaatttcggtgtttagcttttggaattcggaattaggtttggttgattgatgaatttgattttag...

Basic information

species Arabidopsis thaliana
transcript AT1G35680.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86047579|gb|DR343334.1|DR343334
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047584|gb|DR343339.1|DR343339
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86074866|gb|DR370623.1|DR370623
EST:     AGGTTACTGAGGWAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047577|gb|DR343332.1|DR343332
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047593|gb|DR343348.1|DR343348
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|47829285|gb|CK118969.1|CK118969
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047572|gb|DR343327.1|DR343327
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|47828342|gb|CK118026.1|CK118026
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047597|gb|DR343352.1|DR343352
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|47828438|gb|CK118122.1|CK118122
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047569|gb|DR343324.1|DR343324
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047588|gb|DR343343.1|DR343343
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047596|gb|DR343351.1|DR343351
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047574|gb|DR343329.1|DR343329
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047604|gb|DR343359.1|DR343359
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|124764397|gb|EH854527.1|EH854527
EST:     CGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: CGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047585|gb|DR343340.1|DR343340
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047602|gb|DR343357.1|DR343357
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         ATTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047576|gb|DR343331.1|DR343331
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         ATTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047586|gb|DR343341.1|DR343341
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047563|gb|DR343318.1|DR343318
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047599|gb|DR343354.1|DR343354
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         ATTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047573|gb|DR343328.1|DR343328
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GNTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047587|gb|DR343342.1|DR343342
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047582|gb|DR343337.1|DR343337
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|116457672|gb|EG500264.1|EG500264
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047598|gb|DR343353.1|DR343353
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047580|gb|DR343335.1|DR343335
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047568|gb|DR343323.1|DR343323
EST:     AGGTTACTGAGGAAAA-GCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACG
EST: gi|47829926|gb|CK119610.1|CK119610
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047595|gb|DR343350.1|DR343350
EST:     AGGTTWCTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         ATTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047592|gb|DR343347.1|DR343347
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGSTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047565|gb|DR343320.1|DR343320
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACA
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACA
EST: gi|86047601|gb|DR343356.1|DR343356
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047600|gb|DR343355.1|DR343355
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|164191763|gb|ES162230.1|ES162230
EST:     AGGTTACTGAGGAGAAAGCTAAACGGGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACAC
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACAC
EST: gi|86047589|gb|DR343344.1|DR343344
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|47828328|gb|CK118012.1|CK118012
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047566|gb|DR343321.1|DR343321
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTNTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047590|gb|DR343345.1|DR343345
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047571|gb|DR343326.1|DR343326
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047564|gb|DR343319.1|DR343319
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATSTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|116479347|gb|EG521939.1|EG521939
EST:     TCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTTTACACTCAG
genomic: TCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047578|gb|DR343333.1|DR343333
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047583|gb|DR343338.1|DR343338
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
EST: gi|86047594|gb|DR343349.1|DR343349
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTWTTATG                         ATTGGTGGACGCCAATACATWGTGTTTCCAGGGAGATATCTCTAC
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTAC
EST: gi|86047581|gb|DR343336.1|DR343336
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACAATAGTGTTTCCAGGGAGATATCTCTACACTCA
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACA-TAGTGTTTCCAGGGAGATATCTCTACACTCA
EST: gi|86047591|gb|DR343346.1|DR343346
EST:     AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATG                         GTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG
genomic: AGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgt ... gtttgaatagGTTGGTGGACGCCAATACATAGTGTTTCCAGGGAGATATCTCTACACTCAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGAACCGGAGACTACCGATATCGAAGCTGTGGTGGTTTCCGATGTTTCGGAGGTTACTGAGGAAAAAGCTAAACGAGAAGAGATTTTCGCTGTTATTATGgtgagcttgttgaatcatacgaaacaacaaattctcaatttcggtgtttagcttttggaattcggaattaggtttggttgattgatgaatttgattttag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaacaac