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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGTGGTTTCTTCACCTCTGCTGGTTCCTTCTTCCGCAACAATGGCTTTGCTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGGgtaagagacactggttttcgtcgattgtcctgtgcaaagttatgatcttttgttgaattgaggtttaactttactgaattgtattagggtttttgttaat...

Basic information

species Arabidopsis thaliana
transcript AT1G32790.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86051671|gb|DR347426.1|DR347426
EST:     CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGG                         AAGAAGAGTTTTGGTCAAGGGAAACGAAGGATGAATGCTCGAACAAGCATG
genomic: CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGGgtaagagaca ... ggtggtgtagAAGAAGAGTTTTGGTCAAGGGAAACGAAGGATGAATGCTCGAACAAGCATG
EST: gi|86051683|gb|DR347438.1|DR347438
EST:     CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGG                         AAGAAGAGTTTTGGTCAAGGGAAACGAAGGATGAATGCTCGAACAAGCATG
genomic: CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGGgtaagagaca ... ggtggtgtagAAGAAGAGTTTTGGTCAAGGGAAACGAAGGATGAATGCTCGAACAAGCATG
EST: gi|164037689|gb|ES143874.1|ES143874
EST:     CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGG                         AAGAAGAGTTTTGGTCAAGGGAAACG
genomic: CTGGTACCGGAAATGGCGGATACGGTAACGAAAACGGTGGTTTCCGACGGgtaagagaca ... ggtggtgtagAAGAAGAGTTTTGGTCAAGGGAAACG