1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTCAAATCTACTTCAACTCTATTTCCAGTCTCCACATTTTCCCACAAATTTCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGCAAGTAAgtaagttctgttcatattcctctgtttttttttgtttgtgtgtttgtcagatccattctctatagcttgtgagctgtgaccattgtatatatgagacttg...
species | Arabidopsis thaliana |
transcript | AT1G31850.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGC----AA GTGAGGTTTGGTTTTGGTGTTATAGAATTATGAAGAGCGGGAAGCAATCTTEST: gi|116420431|gb|EG463023.1|EG463023
genomic: TCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGCAAGTAAgtaagttctg ... gaatgtacagGTGAGGTTTGGTTTTGGTGTTATAGAATTATGAAGAGCGGGAAGCAATCTT
EST: TCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGC----AA GTGAGGTTTGGTTTTGGTGTTATAGAATTATGAAGAGCGGGAAGCAATCTT
genomic: TCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGCAAGTAAgtaagttctg ... gaatgtacagGTGAGGTTTGGTTTTGGTGTTATAGAATTATGAAGAGCGGGAAGCAATCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCAAATCTACTTCAACTCTATTTCCAGTCTCCACATTTTCCCACAAATTTCAACTCTTGTTCTCTTCCTCCAAAGTAAAAAACAAAACACTGCAAGTAAgtaagttctgttcatattcctctgtttttttttgtttgtgtgtttgtcagatccattctctatagcttgtgagctgtgaccattgtatatatgagacttg
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