Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATAATCCATGGAGCTGGAGCTGCTACGACGACGTTATCGACGTTTAATTCCGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattttatttgatgatcgatctgcattctctgatttcgatttctggtgttttggagcttctattgagatggatttgtgagatcttaaagcagtttcgttgtttgattttgatgcag

Basic information

species Arabidopsis thaliana
transcript AT1G30120.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86046243|gb|DR341998.1|DR341998
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046288|gb|DR342043.1|DR342043
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         T
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcag-
EST: gi|86046288|gb|DR342043.1|DR342043
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         T
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcag-
EST: gi|86046257|gb|DR342012.1|DR342012
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046264|gb|DR342019.1|DR342019
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046249|gb|DR342004.1|DR342004
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAAGAGC
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAA-GAGC
EST: gi|86046246|gb|DR342001.1|DR342001
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATA-AGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046259|gb|DR342014.1|DR342014
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCYTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046232|gb|DR341987.1|DR341987
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046280|gb|DR342035.1|DR342035
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046255|gb|DR342010.1|DR342010
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046294|gb|DR342049.1|DR342049
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046283|gb|DR342038.1|DR342038
EST:     CATCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGTCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046254|gb|DR342009.1|DR342009
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046244|gb|DR341999.1|DR341999
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046252|gb|DR342007.1|DR342007
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046284|gb|DR342039.1|DR342039
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046261|gb|DR342016.1|DR342016
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046289|gb|DR342044.1|DR342044
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046296|gb|DR342051.1|DR342051
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046269|gb|DR342024.1|DR342024
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046273|gb|DR342028.1|DR342028
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046272|gb|DR342027.1|DR342027
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|124771121|gb|EH861251.1|EH861251
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTA
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTA
EST: gi|86046229|gb|DR341984.1|DR341984
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046275|gb|DR342030.1|DR342030
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046233|gb|DR341988.1|DR341988
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|124906041|gb|EH980121.1|EH980121
EST:     CTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046248|gb|DR342003.1|DR342003
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046256|gb|DR342011.1|DR342011
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046236|gb|DR341991.1|DR341991
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGAGAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046253|gb|DR342008.1|DR342008
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046271|gb|DR342026.1|DR342026
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046274|gb|DR342029.1|DR342029
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046282|gb|DR342037.1|DR342037
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046287|gb|DR342042.1|DR342042
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046279|gb|DR342034.1|DR342034
EST:     CGTCGATTCCAAGAAACTCTTCGTTGSTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046251|gb|DR342006.1|DR342006
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046270|gb|DR342025.1|DR342025
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046242|gb|DR341997.1|DR341997
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAG
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAG
EST: gi|86046240|gb|DR341995.1|DR341995
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|47830958|gb|CK120642.1|CK120642
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046285|gb|DR342040.1|DR342040
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046247|gb|DR342002.1|DR342002
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046290|gb|DR342045.1|DR342045
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046276|gb|DR342031.1|DR342031
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046258|gb|DR342013.1|DR342013
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046241|gb|DR341996.1|DR341996
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046277|gb|DR342032.1|DR342032
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046250|gb|DR342005.1|DR342005
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046234|gb|DR341989.1|DR341989
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046267|gb|DR342022.1|DR342022
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046245|gb|DR342000.1|DR342000
EST:     CATCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATMTATAGTGTCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046268|gb|DR342023.1|DR342023
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046228|gb|DR341983.1|DR341983
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046295|gb|DR342050.1|DR342050
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTSAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046230|gb|DR341985.1|DR341985
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046281|gb|DR342036.1|DR342036
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046238|gb|DR341993.1|DR341993
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046266|gb|DR342021.1|DR342021
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|124953141|gb|EL028357.1|EL028357
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGT
EST: gi|86046265|gb|DR342020.1|DR342020
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046286|gb|DR342041.1|DR342041
EST:     CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCCAGAGATATATAGTGGCTGGATCTGATGCGAGTAAGAAGAGCT
EST: gi|86046263|gb|DR342018.1|DR342018
EST:     CGTCGATTCCAAGARACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAG                         TGAGGAGCCCAGAGATATATAGTGGCTGGATCTTGATGCGAGTAAGAAGAG
genomic: CGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattt ... tttgatgcagTGAGGAGCC-AGAGATATATAGTGGCTGGATCT-GATGCGAGTAAGAAGAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATAATCCATGGAGCTGGAGCTGCTACGACGACGTTATCGACGTTTAATTCCGTCGATTCCAAGAAACTCTTCGTTGCTCCTTCTCGCACAAATCTTTCAGgttcgaattttatttgatgatcgatctgcattctctgatttcgatttctggtgttttggagcttctattgagatggatttgtgagatcttaaagcagtttcgttgtttgattttgatgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA