1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGAACATATTGAGTTGCATAAGCTTGATGGAATTGTCTACTTTGCTGATGATGACAATATCTACTCGCTTGAGCTCTTTCAAAGCTTGAGACAAATCAGgtgactcaaaaagactgctcattacttttgctgtctctaattgatggtaattttgtgtgaaatagacttattagagagactgcggtttatgtttgagttt...
species | Arabidopsis thaliana |
transcript | AT1G27600.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAAAGCTTGAGACAAATCAG CCGATTTGGGACTTGGCCTGTTGCTATGCTCGCACAAAGCAAAAACAAGGC
genomic: CAAAGCTTGAGACAAATCAGgtgactcaaa ... cattgtgtagCCGATTTGGGACTTGGCCTGTTGCTATGCTCGCACAAAGCAAAAACAAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAACATATTGAGTTGCATAAGCTTGATGGAATTGTCTACTTTGCTGATGATGACAATATCTACTCGCTTGAGCTCTTTCAAAGCTTGAGACAAATCAGgtgactcaaaaagactgctcattacttttgctgtctctaattgatggtaattttgtgtgaaatagacttattagagagactgcggtttatgtttgagttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgtctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatagac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tagagaga