1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAATCAGAAGTTGTAAACACTTTTCCTGTCTCTTTCTGCTACCCGAATTTATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAGgtaatttcaagacttaaacttgaagtatctctggccttcttctgctgtctgtttcatttttgaaatcgatttggagattagatctgactcagcttcgact...
species | Arabidopsis thaliana |
transcript | AT1G03520.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAG ATTTCAAGCAATCTATGAATTCGACGGCTGATGTTAATCCAGAGCCTCCTAEST: gi|86055423|gb|DR351180.1|DR351180
genomic: ATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAGgtaatttcaa ... gtagaatcagATTTCAAGCAATCTATGAATTCGACGGCTGATGTTAATCCAGAGCCTCCTA
EST: ATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAG ATTTCAAGCAATCTATGAATTCGACGGCTGATGTTAATCCAGAGCCTCCTA
genomic: ATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAGgtaatttcaa ... gtagaatcagATTTCAAGCAATCTATGAATTCGACGGCTGATGTTAATCCAGAGCCTCCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATCAGAAGTTGTAAACACTTTTCCTGTCTCTTTCTGCTACCCGAATTTATCTTCTTTAGCGTCTGTCTCTTTCAGCGGACGTGTCTTGTCTCTTTAAGgtaatttcaagacttaaacttgaagtatctctggccttcttctgctgtctgtttcatttttgaaatcgatttggagattagatctgactcagcttcgact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttcttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctgactc