1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatggctaacctaatgtgttgttcctgaggctactccgctgctgctgttttcctacgtcgttgtctaattcaagttccgtatgccttatgtgacagATGGCAAGACTGAATGAGGGGCTGTCATTATTTGATGCAATACTGATTGTTCCAATGTTTCAAATTGCTTGGACCTTCTTCTCTATTTGTACAGGATTTG
species | Zea mays |
transcript | GRMZM2G477146_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GTTCACATATTCGATCGTTCTCCTGTTTCTGTGTACTGCTGGGATTTGGG ATGGCA-GACTGAATGAGGGGCTGTCATTATTTGATGNCA-TACTGATTGEST: gi|32847829|gb|CD987510.1|CD987510
genomic: GTTCACATATTCGATCGTTCTCCTGTTTCTGTGTACTGCTGG-ATTTTGGgtatggctaa ... tatgtgacagATGGCAAGACTGAATGAGGGGCTGTCATTATTTGATG-CAATACTGATTG
EST: GGTTCACATATTCCATCGTTCTCCTGTTTCTGTGTACTGCTGGATTTTGG ATGGCAAGACTGAATGAAGGAGCTGTCATTATTTGATGCAATACTGATTGTEST: gi|6056444|gb|AW090954.1|AW090954
genomic: GGTTCACATATTCGATCGTTCTCCTGTTTCTGTGTACTGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGCAAGACTGAATGAGGG-GCTGTCATTATTTGATGCAATACTGATTGT
EST: TTCTG-GTACTGCTGGATTTTGG NEST: gi|6056444|gb|AW090954.1|AW090954
genomic: TTCTGTGTACTGCTGGATTTTGGgtatggctaa ... tatgtgacag-
EST: TTCTG-GTACTGCTGGATTTTGG N
genomic: TTCTGTGTACTGCTGGATTTTGGgtatggctaa ... tatgtgacag-
ctgctgttttcctacgtcgttgtctaattcaagttccgtatgccttatgtgacagATGGCAAGACTGAATGAGGGGCTGTCATTATTTGATGCAATACTGATTGTTCCAATGTTTCAAATTGCTTGGACCTTCTTCTCTATTTGTACAGGATTTG
gtctaat putative branch site (score: 120)
taattcaa TA-rich tract