1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
aAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAAT
species | Zea mays |
transcript | GRMZM2G472991_T04 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CAATATCATGATTGATGATGATGAA AAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATEST: gi|33094905|gb|CF054899.1|CF054899
genomic: CAATATCATGATTGATGATGATGAAa ... aAAA-TTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATgtatgtagct
EST: CAATATCATGATTGATGATGATGAA AAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATEST: gi|20301471|gb|BQ164414.1|BQ164414
genomic: CAATATCATGATTGATGATGATGAAa ... aAAA-TTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATgtatgtagct
EST: CAATATCATGATTGATGATGATGAA AAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATEST: gi|33095027|gb|CF055021.1|CF055021
genomic: CAATATCATGATTGATGATGATGAAa ... aAAA-TTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATgtatgtagct
EST: CAATATCATGATTGATGATGATGAA AAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAAT
genomic: CAATATCATGATTGATGATGATGAAa ... aAAA-TTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAATgtatgtagct
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aAAATTACGGTTATTGATTTTCCACAGATGGTATCTGTTTCTCATCGTAATGCCCAAAT
- - - - - - - - - - - - CAGATG