1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtgaagtcacttccaatgcatcctgagtcattttgggtgcagtcactccaatctattttaacgcttatatgttcccccccccctgttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAGAGTCTTGCG
species | Zea mays |
transcript | GRMZM2G451366_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32841613|gb|CD981294.1|CD981294
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|211499698|gb|FL406841.1|FL406841
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: CTACCCCTCCTGAATTTTTTGGAAAGC-CTGGTGGGCTTCATGACACTGG AGAATCTACAGATGEST: gi|32840746|gb|CD980427.1|CD980427
genomic: CTACCCCTCCTGAATTTTT-GGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATG
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|149109482|gb|EE293326.2|EE293326
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|89252033|gb|DY623819.1|DY623819
genomic: TGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32841252|gb|CD980933.1|CD980933
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32839985|gb|CD979666.1|CD979666
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32839499|gb|CD979180.1|CD979180
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32839696|gb|CD979377.1|CD979377
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32840986|gb|CD980667.1|CD980667
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32841145|gb|CD980826.1|CD980826
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|211532947|gb|FL381078.1|FL381078
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATEST: gi|32840104|gb|CD979785.1|CD979785
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGAT
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32840762|gb|CD980443.1|CD980443
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|60347494|gb|DN214467.1|DN214467
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TTTGGAAAGCACTGGTGGTTTTCATGACATTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|71326873|gb|DR800095.1|DR800095
genomic: TTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTG-ATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32863734|gb|CF003416.1|CF003416
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32841116|gb|CD980797.1|CD980797
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32841526|gb|CD981207.1|CD981207
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAEST: gi|32945502|gb|CF050321.1|CF050321
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
EST: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAG AGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
genomic: TCTACCCCTCCTGAATTTTTGGAAAGCACTGGTGGTCTTCATGACACTAGgtgaagtcac ... gttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGA
cagtcactccaatctattttaacgcttatatgttcccccccccctgttttggcagAGAATCTACAGATGTTGAGTCAGTAATCCGAACTGTCAGATTAGTTTCTGAGAGTCTTGCG
ttttaac putative branch site (score: 76)
tatgttcccccccccc putative PPT
aatctattttaa TA-rich tract