1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...tcttgataggaggatctatgtgttctgttgagtgttatatgagctgcactacttaccttcgttagttctagttgtataaggttttttcttatattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT
species | Zea mays |
transcript | GRMZM2G376074_T02 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CAGAACCTCAGAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAG CATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCEST: gi|67022296|gb|CO451045.1|CO451045
genomic: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAGgtaaaccaat ... atattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGC
EST: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAG CATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCEST: gi|32931325|gb|CF036137.1|CF036137
genomic: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAGgtaaaccaat ... atattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGC
EST: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAG CATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCEST: gi|211061749|gb|FL343242.1|FL343242
genomic: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAGgtaaaccaat ... atattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGC
EST: CAGAACCTCAGAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAG CATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGC
genomic: CAGAACCTCAAAGTCTTGAAGCTGTTGTCAGTTCACTTATATGTGAAAAGgtaaaccaat ... atattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGC
gcactacttaccttcgttagttctagttgtataaggttttttcttatattttcagCATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT
tacttac putative branch site (score: 98)
ttttttcttatatttt putative PPT
tataaggttttttctt TA-rich tract