1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
...agaaagaaaaatgacatccctgtgttattcattctggtatctaaatctgtgccgtgactatgccttctcaaaggctagtaatattgatctgcatttgcagGTAATTGCTTGTCCTTGTGCTCTTGGGCTTGCCACTCCCACTGCTGTACTG
species | Zea mays |
transcript | GRMZM2G315931_T02 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CTGGAGTATTTTGGGTTCTCAACTTGTACCTGCTGCTATC-AACATGGAG GTAATTGCTTGTCCTTGTGCNNTCT-GG-CTTGCCACTCCCACTGCTGTACEST: gi|211050286|gb|FL014622.1|FL014622
genomic: CTGGAGTATTTTGGGTTCTCAACTTGTACCTGCTGCTATCCAACATGGAGgtgcaatgtc ... gcatttgcagGTAATTGCTTGTCCTTGTGC--TCTTGGGCTTGCCACTCCCACTGCTGTAC
EST: TGGAGTATTTTGGGTTCTCAACTTGTACCTGCTGCTATCCAACATGGNAG -TAATTGCTTGTCCTTGTGCTCTTGGGCTTGCCACTCCCACTGCTGTACT
genomic: TGGAGTATTTTGGGTTCTCAACTTGTACCTGCTGCTATCCAACATGG-AGgtgcaatgtc ... gcatttgcagGTAATTGCTTGTCCTTGTGCTCTTGGGCTTGCCACTCCCACTGCTGTACT
tctgtgccgtgactatgccttctcaaaggctagtaatattgatctgcatttgcagGTAATTGCTTGTCCTTGTGCTCTTGGGCTTGCCACTCCCACTGCTGTACTG
tattgat putative branch site (score: 13)
tagtaatatt TA-rich tract