1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtactttcttccaccttcccctacactatgcttgcaagctactcgattgatttaacattcttattatgtaggcagtgccattgtcaaattacaagtactaactattttgcttctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCTGACTACACTAAGAAGGAGACTGAGAGGCTTCACCGCATGCTGGAGAAG
species | Zea mays |
transcript | GRMZM2G159369_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60349176|gb|DN216149.1|DN216149
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60355512|gb|DN222485.1|DN222485
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32945558|gb|CF050377.1|CF050377
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|33101695|gb|CF061655.1|CF061655
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|18177252|gb|BM378462.1|BM378462
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGTTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|241994843|gb|GR421187.1|GR421187
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|50323733|gb|CO518859.1|CO518859
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|5901141|gb|AW042241.1|AW042241
genomic: CTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|6865233|gb|AW360583.1|AW360583
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGNCAGCTGCAAAGAAGATCATAGGCAAGGGCTCEST: gi|148932685|gb|EC876639.2|EC876639
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|86466435|gb|DY232805.1|DY232805
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|4647206|gb|AI622281.1|AI622281
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60396463|gb|DN229332.1|DN229332
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32857597|gb|CD997278.1|CD997278
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|6227253|gb|AW155852.1|AW155852
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|211059073|gb|FL239922.1|FL239922
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCRAAGAAGATCATAGACAAGGGCTCEST: gi|60350336|gb|DN217309.1|DN217309
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|37380832|gb|CF627255.1|CF627255
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGTAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60399092|gb|DN231906.1|DN231906
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|24934298|gb|CA452516.1|CA452516
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|211474733|gb|FL432049.1|FL432049
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|78084676|gb|DV513069.1|DV513069
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: GCTAAGCTCAGCGTTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32867151|gb|CF006833.1|CF006833
genomic: GCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|24767522|gb|CA402664.1|CA402664
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|21809934|gb|BQ668252.1|BQ668252
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|5922104|gb|AW055498.1|AW055498
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGNTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGNGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|4646531|gb|AI491677.2|AI491677
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|67039449|gb|CO465704.1|CO465704
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|37379835|gb|CF626683.1|CF626683
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32940600|gb|CF045419.1|CF045419
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|78545093|gb|DV622591.1|DV622591
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|31355506|gb|CD439863.1|CD439863
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|31558598|gb|CD527810.1|CD527810
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|33091270|gb|CF051264.1|CF051264
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|71326463|gb|DR799911.1|DR799911
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|211059072|gb|FL239921.1|FL239921
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60356885|gb|DN223858.1|DN223858
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|148961931|gb|EE012723.2|EE012723
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTTTAAAATAGAAGAGGATGTTGCTAAGTTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|6022466|gb|AW067499.1|AW067499
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|37388199|gb|CF631306.1|CF631306
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|20513042|gb|BQ280228.1|BQ280228
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|101386448|gb|EB815241.1|EB815241
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32916349|gb|CF021161.1|CF021161
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|211497907|gb|FK991939.1|FK991939
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|14244876|gb|BG842814.2|BG842814
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|24763724|gb|CA398895.1|CA398895
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|67024988|gb|CO453737.1|CO453737
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32846337|gb|CD986018.1|CD986018
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGCTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|40336546|gb|CK370616.1|CK370616
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAATATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGNCAA-GAAGATCATAGACAAGGGCTEST: gi|32934912|gb|CF039724.1|CF039724
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTG-CAAAGAAGATCATAGACAAGGGCT
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|9254367|gb|BE344835.1|BE344835
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|149096331|gb|EE182050.2|EE182050
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGTTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|14244939|gb|BG842877.2|BG842877
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|37393543|gb|CF634037.1|CF634037
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAATATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|21828690|gb|BQ703374.1|BQ703374
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|6102035|gb|AW126505.1|AW126505
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60343927|gb|DN210900.1|DN210900
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|37397302|gb|CF635947.1|CF635947
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|60358667|gb|DN225640.1|DN225640
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|32862901|gb|CF002583.1|CF002583
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCEST: gi|213192265|gb|FM195988.1|FM195988
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
EST: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAA GCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
genomic: CTCTCTAAAATAGAAGAGGATGTTGCTAAGCTCAGCGGTTCTGCAGCCAAgtactttctt ... tctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTC
tgtaggcagtgccattgtcaaattacaagtactaactattttgcttctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCTGACTACACTAAGAAGGAGACTGAGAGGCTTCACCGCATGCTGGAGAAG
ttttgcttct CT-rich tract
taactatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtactttcttccaccttcccctacactatgcttgcaagctactcgattgatttaacattcttattatgtaggcagtgccattgtcaaattacaagtactaactattttgcttctaaaccagGCATGGAAAGATATATGTGACAGCTGCAAAGAAGATCATAGACAAGGGCTCTGACTACACTAAGAAGGAGACTGAGAGGCTTCACCGCATGCTGGAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA