1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtttgcttattacaaacatctctctctctccttgagtatgcttagcgtgcttgctatcgcatttgattaattaagtaataataaccgagtaattttttttcctttttggttgcagTTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGACCAAGGCTCGCAGCGTGACCTCCCGCTCGTCTGCTTCGAAAGCCACTGCA
species | Zea mays |
transcript | GRMZM2G153754_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAG TTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGACEST: gi|19822067|gb|BQ048091.1|BQ048091
genomic: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAGgtttgcttat ... ttggttgcagTTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGAC
EST: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAG TTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGACEST: gi|26455740|gb|CA827323.1|CA827323
genomic: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAGgtttgcttat ... ttggttgcagTTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGAC
EST: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAG TTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGAC
genomic: CACCCGCTCCTGGACCTTGTCCCAATAACACCGCCTTTTGATTTTTGCAGgtttgcttat ... ttggttgcagTTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGAC
atttgattaattaagtaataataaccgagtaattttttttcctttttggttgcagTTCTCTGCTCAAACTGCCAAATTTCTCAAGCGCAAAACCGCCGAGACCGACCAAGGCTCGCAGCGTGACCTCCCGCTCGTCTGCTTCGAAAGCCACTGCA
taataac putative branch site (score: 4)
ttttttttcctttttg putative PPT
attaattaagtaataa TA-rich tract