1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gttgaaaaaacgttatgctttcaaaaggtgtctttatgcttgcgacctaattttctcttgcacagATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGCAACAGGAAAATTCCCTTTAACATTCATGGTGTGGCTTTCTACAGGAAAAAG
species | Zea mays |
transcript | GRMZM2G121427_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAG ATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGCEST: gi|18053134|gb|BM318792.1|BM318792
genomic: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAGgttgaaaaaa ... tcttgcacagATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGC
EST: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAG ATAACTGGCAA-GCTTTCCAAGTCTCCTTCCGCEST: gi|78545014|gb|DV622512.1|DV622512
genomic: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAGgttgaaaaaa ... tcttgcacagATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGC
EST: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAG ATAACTGGCAAAACTTTCCAAGTCTCCTTCCGCAACAGGAAAATTCCCTTT
genomic: CCGCTGAGGGGTGCAACTTTGGCAACATTGCTGTCCTATATCGAAGACAGgttgaaaaaa ... tcttgcacagATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGCAACAGGAAAATTCCCTTT
cgttatgctttcaaaaggtgtctttatgcttgcgacctaattttctcttgcacagATAACTGGCAAAGCTTTCCAAGTCTCCTTCCGCAACAGGAAAATTCCCTTTAACATTCATGGTGTGGCTTTCTACAGGAAAAAG
acctaat putative branch site (score: 8)
cctaattttctctt CT-rich tract
taattttct TA-rich tract