1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgaatactctctatatccagattttagagggcttggttatttcggtgccaaatacttatattttgcttgatgacaagctaatttactgatttttccatcttgaaaaagtatttgttattatatgaccttctggtgtttttggtaaacttttttttctcatttttttgccaccctaatgtttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAATCCCTAATACAAACGAGTCACACTCGGTTCAAATTATTTTGCCTCAGA
species | Zea mays |
transcript | GRMZM2G117507_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|5296179|gb|AI782859.1|AI782859
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|31352817|gb|CD437174.1|CD437174
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|6194638|gb|AW146742.1|AW146742
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|5901301|gb|AW042401.1|AW042401
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|32934162|gb|CF038974.1|CF038974
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|15313508|gb|BI478735.1|BI478735
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAEST: gi|5895558|gb|AW036804.1|AW036804
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
EST: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAG GTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
genomic: CTGCAAAGTGCAAGAAGGTGGTGTGTGATCCTTCGTATTTACAAAACAAGgtgaatactc ... ttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCA
gtttttggtaaacttttttttctcatttttttgccaccctaatgtttctcgacagGTCAGGAAGATTGGTAGAGTTGTTCGTGCAATTGCTATCATGAGCCACCCAATCCCTAATACAAACGAGTCACACTCGGTTCAAATTATTTTGCCTCAGA
ccctaat putative branch site (score: 327)
tgtttctc CT-rich tract
taaacttttttttctc TA-rich tract