1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtgccttttttcctggctaaagaaactatcaagcctatgcttattggattttattcctaattatgcgcgtgcttggctgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTTACATCCTGTAGCCGAGTTCCTCAAAAGGACAAAGTCCTTACAGTGGTT
species | Zea mays |
transcript | GRMZM2G110289_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|18384682|gb|BM417881.1|BM417881
genomic: GGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|18384842|gb|BM418041.1|BM418041
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATCAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|67010636|gb|CO439385.1|CO439385
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: ATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTEST: gi|18384843|gb|BM418042.1|BM418042
genomic: ATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAA-Ggtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|16746087|gb|BM032517.1|BM032517
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|18384841|gb|BM418040.1|BM418040
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|12046108|gb|BF728247.1|BF728247
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGATGGTTEST: gi|18384685|gb|BM417884.1|BM417884
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|18384683|gb|BM417882.1|BM417882
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTEST: gi|16745974|gb|BM032404.1|BM032404
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTT
EST: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAG GGAAGATCACAGTTGTGGATATTGGC
genomic: TGGGAATGAGGGAATACGTGAGTTGATGTCTGCATTATCTGCTCACAAAGgtgccttttt ... tgaattacagGGAAGATCACAGTTGTGGATATTGGC
gcctatgcttattggattttattcctaattatgcgcgtgcttggctgaattacagGGAAGATCACAGTTGTGGATATTGGCAACAACAACATTAGCCCGGAAGGTTTACATCCTGTAGCCGAGTTCCTCAAAAGGACAAAGTCCTTACAGTGGTT
tcctaat putative branch site (score: 105)
attttattcctaatta TA-rich tract