1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtacagtcaacatgcctttttgtctatatggttcaatcttagtcctttacattactgataaatgtctatttatcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTAAAGGCGCATGGCCATTCTCCACCGCGGATCATGGTTGGCCTATATCTG
species | Zea mays |
transcript | GRMZM2G065494_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAG GTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTEST: gi|31356628|gb|CD440985.1|CD440985
genomic: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAGgtacagtcaa ... atcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCT
EST: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAG GTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTEST: gi|22489164|gb|BU049087.1|BU049087
genomic: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAGgtacagtcaa ... atcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCT
EST: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAG GTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTEST: gi|18383894|gb|BM417094.1|BM417094
genomic: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAGgtacagtcaa ... atcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCT
EST: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAG GTTCTTGACGACTGCCCTGG-GATCTGAATGACTGGTACCGTCACACATCT
genomic: AGTTTGGTCCCACCCTTAAACTAGCACACAACTATATCAAGAAATCACAGgtacagtcaa ... atcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCT
tatggttcaatcttagtcctttacattactgataaatgtctatttatcatgaaagGTTCTTGACGACTGCCCTGGTGATCTGAATGACTGGTACCGCCACACATCTAAAGGCGCATGGCCATTCTCCACCGCGGATCATGGTTGGCCTATATCTG
tactgat putative branch site (score: 150)
ataaatgtctatttat TA-rich tract