1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtagatcaacacacaacacataatctgaatataaacgcacatgatcctactagttctgttttcacaatctaacaactctttgcaaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATCGGTCCTTCTTCATACCATACCGATGGCAACAAAACAATGTGTTCGGCC
species | Zea mays |
transcript | GRMZM2G051262_T01 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTCCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|91054949|gb|EB165367.1|EB165367
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|19769978|gb|BQ034699.1|BQ034699
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: GGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCGCTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|76281864|gb|DV021432.1|DV021432
genomic: GGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: CCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|60395015|gb|DN227884.1|DN227884
genomic: CCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|149100384|gb|EE186456.2|EE186456
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|149109611|gb|EE293398.2|EE293398
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|19769471|gb|BQ034192.1|BQ034192
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: GTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|71772096|gb|DR970033.1|DR970033
genomic: GTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: CCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|78543976|gb|DV621474.1|DV621474
genomic: CCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|19769334|gb|BQ034055.1|BQ034055
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: CTAAGACGGCCTTACCCCTCGCGCGGGAGTGTCTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|9731913|gb|BE510665.1|BE510665
genomic: CTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|94477519|gb|EB706477.1|EB706477
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATTTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|37389107|gb|CF631771.1|CF631771
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: CCCTCGCGCGGGAGTGACTNGTCGACATGGGAG GCATTGGCCGCACTGCCGTTTCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|60352444|gb|DN219417.1|DN219417
genomic: CCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|6538807|gb|AW224946.1|AW224946
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATEST: gi|211283929|gb|FL480867.1|FL480867
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
EST: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG GCATTGGCCGHACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
genomic: ATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAGgtagatcaac ... aaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATAT
acatgatcctactagttctgttttcacaatctaacaactctttgcaaactgacagGCATTGGCCGCACTGCCGTTCCTGGACAGAGAGCTTTCCCCTGCATTATATCGGTCCTTCTTCATACCATACCGATGGCAACAAAACAATGTGTTCGGCC
atctaac putative branch site (score: 87)
aatctaa TA-rich tract