1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaaaacccttgacacagagctgcaaagtccatcatttgcactgaagcattcctgacgttgcttgttttgcgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTATATCAGGATTTGGGCATACAGGATCTGACGGTCCAAACTGATGAGTTTG
species | Zea mays |
transcript | GRMZM2G017365_T08 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTAEST: gi|76014355|gb|DT941525.1|DT941525
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTAEST: gi|166652595|gb|EG287254.1|EG287254
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCEST: gi|211384669|gb|FL388814.1|FL388814
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCC
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTAEST: gi|211489499|gb|FL457182.1|FL457182
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTAEST: gi|71442151|gb|DR823201.1|DR823201
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
EST: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGG GTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
genomic: GATTCTGGGAGCTTGTTCCTGGTCAGGCAGTTGGATCTCTCTCCATTAGGgtaaaaccct ... cgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTA
aagtccatcatttgcactgaagcattcctgacgttgcttgttttgcgctgtatagGTGAAGAGCGGCGCTGACGACCGGGCAGTCCTTGAATACACGCATGGTTTATATCAGGATTTGGGCATACAGGATCTGACGGTCCAAACTGATGAGTTTG
tcctgac putative branch site (score: 2)
atcattt TA-rich tract