1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatgtgctctgtccacattgaatgctctggttatttggaagttggatctctgctcacctgctgccacctgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTAGAGCGGCCGTTTATTTTGAGGCAGGCGATTCGTATATTTTCTATAGCG
species | Zea mays |
transcript | GRMZM2G438895_T03 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAG GATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTEST: gi|4646794|gb|AI621869.1|AI621869
genomic: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAGgtatgtgctc ... tgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCT
EST: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAG GATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTEST: gi|18171613|gb|BM341453.1|BM341453
genomic: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAGgtatgtgctc ... tgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCT
EST: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAG GATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTEST: gi|18174951|gb|BM350339.1|BM350339
genomic: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAGgtatgtgctc ... tgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCT
EST: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAG GATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTEST: gi|113814220|gb|DW931581.1|DW931581
genomic: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAGgtatgtgctc ... tgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCT
EST: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAG GATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGG
genomic: CTACGATCAGACAGAAATACATATGTGAGAAGGTTTTTGATCTTCTTAAGgtatgtgctc ... tgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGG
gctctggttatttggaagttggatctctgctcacctgctgccacctgttttgcagGATGCTTGGAACAAATTCACTTCGGAGGAGCGCTAGGGTGGCGGGGGTGCTAGAGCGGCCGTTTATTTTGAGGCAGGCGATTCGTATATTTTCTATAGCG
tgctcac putative branch site (score: 2)
cctgtttt putative PPT
ttattt TA-rich tract