1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaaagaaaggataaaaaaaaagagtaagcgcacataagattaataatatgggttgtgctaatatatatctctatggaagGTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATGGGGAAGTGGGATGAAAGTATGCATTATATCATCAACAATGATGCCTCCA
species | Zea mays |
transcript | GRMZM2G409265_T02 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAG GTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATGEST: gi|60344714|gb|DN211687.1|DN211687
genomic: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAGgtaaagaaag ... tctatggaagGTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATG
EST: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAG GTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATGEST: gi|60344453|gb|DN211426.1|DN211426
genomic: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAGgtaaagaaag ... tctatggaagGTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATG
EST: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAG GTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATG
genomic: GCAAACTGACGTTTAAAGAGCAGTCTTTCCTTGATCGGAATCCTCGCCAGgtaaagaaag ... tctatggaagGTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATG
taagcgcacataagattaataatatgggttgtgctaatatatatctctatggaagGTTCAAGGAGTTGTCAACGATGCTGATGGAAGCAAGGTCGCAACATTGATGGGGAAGTGGGATGAAAGTATGCATTATATCATCAACAATGATGCCTCCA
tgctaat putative branch site (score: 29)
tatctct putative PPT
acataagattaataat TA-rich tract