1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatgtgggcctttcctttgagcattgttataccgtagtgcattttgtgtttacttttttcttgtcctgttcttttatgctgttactgttagctaacctgttgctaacactgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGATGAGCTATCAGTACAAACAAACTAAAGTGGGCTGTAGGTCTAATCAAAC
species | Zea mays |
transcript | GRMZM2G340749_T02 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|50331351|gb|CO526477.1|CO526477
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|67024274|gb|CO453023.1|CO453023
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|18175970|gb|BM351092.1|BM351092
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|17931224|gb|BM268184.1|BM268184
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAAAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|31359147|gb|CD443504.1|CD443504
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|37378184|gb|CF625760.1|CF625760
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|213169625|gb|FM185632.1|FM185632
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGAEST: gi|44901171|gb|CK827716.1|CK827716
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
EST: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATG GTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
genomic: GGATCATATGTATACTTTGATTTCCATGTCACCGAGGATGGCTCAGGATGgtatgtgggc ... ctgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGA
tcctgttcttttatgctgttactgttagctaacctgttgctaacactgcttgcagGTGCCAAAGAATCAAGAATGACTTCACATTCGAGTACAACTTCTTGGAGGATGAGCTATCAGTACAAACAAACTAAAGTGGGCTGTAGGTCTAATCAAAC
tgctaac putative branch site (score: 88)
ttcttttat TA-rich tract