1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtattgcgtctcagtatatatgctctagctgtttcagtactgtagagagacaacgcaacagctgctgttcgacttcgacctccagtttcttgacatgttttcgtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGACCCCGAGGTCAGCCGCGCCCTCTACGAGCGCGCGGCCAGCGCCGACAAGA
species | Zea mays |
transcript | GRMZM2G306851_T01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAG GTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGACEST: gi|71762597|gb|DR960534.1|DR960534
genomic: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAGgtattgcgtc ... gtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGAC
EST: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAG GTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGACEST: gi|71448290|gb|DR829340.1|DR829340
genomic: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAGgtattgcgtc ... gtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGAC
EST: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAG GTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGACEST: gi|149083205|gb|EE172480.2|EE172480
genomic: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAGgtattgcgtc ... gtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGAC
EST: CGCTGGAGCTTTTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAG GTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGAC
genomic: CGCTGGAGCTTCTCAGGACCAGCATGGATGTGGAAGACAGTCTGTCAGAGgtattgcgtc ... gtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGAC
acagctgctgttcgacttcgacctccagtttcttgacatgttttcgtttccacagGTGAGGATGCCGTTCCTCGTCCTGCACGGCGAGGCCGACGCGGTGACCGACCCCGAGGTCAGCCGCGCCCTCTACGAGCGCGCGGCCAGCGCCGACAAGA
tcttgac putative branch site (score: 7)
ttttcgtttcc putative PPT
atgtttt TA-rich tract