1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaggacaacctgcctctctgttacgatgaacaagtttgtacttagttcttactgggatctggatcaaatagtgtcaactgctttctcatgttagtaacacagtgttttctcgcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
species | Zea mays |
transcript | GRMZM2G147882_T03 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCGEST: gi|32924156|gb|CF028968.1|CF028968
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|211415426|gb|FL477512.1|FL477512
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCGEST: gi|32924444|gb|CF029256.1|CF029256
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|211525267|gb|FL432922.1|FL432922
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: CTTGGCGACATGCTCGAAAGGTGGAGGTAACGGCGTTTTCAG GTCCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCGEST: gi|32923806|gb|CF028618.1|CF028618
genomic: CTTGGCGACATGCTCGAAAGGTGGA-GTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGT-CAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32924110|gb|CF028922.1|CF028922
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|71299018|gb|DR785501.1|DR785501
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: TTCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32923874|gb|CF028686.1|CF028686
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32924334|gb|CF029146.1|CF029146
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32923638|gb|CF028450.1|CF028450
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|76287314|gb|DV026882.1|DV026882
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCGEST: gi|71429425|gb|DR810475.1|DR810475
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCGEST: gi|32858735|gb|CD998416.1|CD998416
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32923912|gb|CF028724.1|CF028724
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGCCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32923869|gb|CF028681.1|CF028681
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32923708|gb|CF028520.1|CF028520
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|32924079|gb|CF028891.1|CF028891
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGTTACTCGEST: gi|74241069|gb|DT648983.1|DT648983
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
EST: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAG GTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
genomic: ATCGTCAACCTTGGCGACATGCTCGAAAGGTGGAGTAACGGCGTTTTCAGgtaggacaac ... gcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
aatagtgtcaactgctttctcatgttagtaacacagtgttttctcgcacgtgtagGTCAACCTTACATCGAGTGGTCCTAGATGGGCGAGAACGCTACTCG
tagtaac putative branch site (score: 1)
ttttctcgc putative PPT
ttagtaa TA-rich tract