1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtatctgatatgtttgacatttttgtaaaatttccttagcctactttatatggaatgttcattgtcaaaaatgtggttcgtacattctaattcctctttagaatccagTGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCCTGGGATCCACAGAACCGGGGAAGGGCATAATCAATTCTGGGTTCTGGAC
species | Zea mays |
transcript | GRMZM2G085747_T04 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AAAGATAGTCGTTGTGGGAGCTGGAAGAATCCAGEST: gi|32850587|gb|CD990268.1|CD990268
genomic: AAAGATAGTCGTTGTGGGAGCT-G--G-A---AGgtatctgata ... taga
EST: CCTCTCCAGGATTTTACGAATCAAAAGATAGTCGTTGTGGGAGCTGGAAG TGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCCEST: gi|67010755|gb|CO439504.1|CO439504
genomic: CCTCTCCAGGATTTTACGAATCAAAAGATAGTCGTTGTGGGAGCTGGAAGgtatctgata ... tagaatccagTGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCC
EST: CCTCTCCAGGATTTTACGAATCAAAAGATAGTCGTTGTGGGAGCTGGAAG TGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCC
genomic: CCTCTCCAGGATTTTACGAATCAAAAGATAGTCGTTGTGGGAGCTGGAAGgtatctgata ... tagaatccagTGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCC
aatgttcattgtcaaaaatgtggttcgtacattctaattcctctttagaatccagTGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCCTGGGATCCACAGAACCGGGGAAGGGCATAATCAATTCTGGGTTCTGGAC
ttctaat putative branch site (score: 2)
ttctaattcctcttt CT-rich tract
attctaatt TA-rich tract