1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtagaccaagttcagtgcaaggttaattttactacaatgaactgtgttgctgtaaggcctcttgtctgaattcctatgttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAACTTCTTATAATG
species | Zea mays |
transcript | GRMZM2G081970_T01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAEST: gi|8368867|gb|BE051812.1|BE051812
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAEST: gi|166459939|gb|EG305341.1|EG305341
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAA
EST: GTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAEST: gi|60339918|gb|DN206891.1|DN206891
genomic: GTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAEST: gi|37399770|gb|CF637220.1|CF637220
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAEST: gi|67035181|gb|CO463714.1|CO463714
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAEST: gi|78021088|gb|DV489475.1|DV489475
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
EST: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAG TGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
genomic: CAGGGTTACCGCTCTCTTGGTTTTCGTTTTGGTGATGTATGCTATATAAGgtagaccaag ... ttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtagaccaagttcagtgcaaggttaattttactacaatgaactgtgttgctgtaaggcctcttgtctgaattcctatgttggatgcagTGATGTCAGTGATATACCCGAAGAAACATACAAGCTTCTGGAAAACTGTGAACTTCTTATAATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT