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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagctcagcttgacactgaacctttcgctaatccgttacaaaagtgcattctgtaattatttctccgttcggttgtggtgattgttgagtatgtgactcttagtaacacatacttattgatctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAGCAACTATTTATCTGGGCGTCTTGGAATGAGTGTGATTTTAATAAGTCAA

Basic information

species Zea mays
transcript GRMZM2G061928_T02
intron # 8
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G061928_T03 (Zea mays), 3'ss of exon 8
lower sequence: LOC_Os04g59040.3 (Oryza sativa), 3'ss of exon 7
gtaag--ctcagcttgacactgaacctttcgctaatccgttacaaaagtgcattctgta-attatttctccgttcggttgtggtgattgttgagtatgtgactcttagtaacacatacttattgatctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAGCAACTATTTATCTGGGCGTCTTGGAATGAGTGTGATTTTAATAAGTCAA
|||||  ||| | |   || ||||   |     | ||| | |||| |    ||| |||   || |      | |  |  |     | | ||   | ||  |    | |  ||| ||  || || || | ||| |||||| ||||||||||| ||||| |||||||||||||||||||||| ||  | |   | ||||||  |      | | ||  |||  |  |  | || |  |
gtaagttctctgttctgcagtgaaatata----agtccataacaagatgtgattgtgtgtgttgtggaataggtatgaagataccactattccttttggcatatattgacacatatttttgtttatttaatctcagGGACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTGCAAAACTGGA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5770204|gb|AI973378.1|AI973378
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|31356747|gb|CD441104.1|CD441104
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|24768592|gb|CA403721.1|CA403721
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|4834930|gb|AI670156.1|AI670156
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|211328726|gb|FL322907.1|FL322907
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|101401489|gb|EB822424.1|EB822424
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|31355864|gb|CD440221.1|CD440221
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5847103|gb|AW000182.1|AW000182
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5847111|gb|AW000190.1|AW000190
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|78104561|gb|DV522979.1|DV522979
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|67014869|gb|CO443618.1|CO443618
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60347915|gb|DN214888.1|DN214888
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5006060|gb|AI712122.1|AI712122
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60349652|gb|DN216625.1|DN216625
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|211402007|gb|FL112901.1|FL112901
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|7118905|gb|AW497510.1|AW497510
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5901415|gb|AW042515.1|AW042515
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGCATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60339231|gb|DN206204.1|DN206204
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60356641|gb|DN223614.1|DN223614
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|37379431|gb|CF626460.1|CF626460
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|6865274|gb|AW360624.1|AW360624
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60348025|gb|DN214998.1|DN214998
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60344717|gb|DN211690.1|DN211690
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|28873765|gb|CB329709.1|CB329709
EST:     GATGCATTTTTGCCTGCGACCCCAGCTCGAGAGGCCCTTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60343029|gb|DN210002.1|DN210002
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|71759727|gb|DR957664.1|DR957664
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60396650|gb|DN229518.1|DN229518
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|32931451|gb|CF036263.1|CF036263
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGACTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|67017766|gb|CO446515.1|CO446515
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAA
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAA-
EST: gi|67012010|gb|CO440759.1|CO440759
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|32909251|gb|CF014063.1|CF014063
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|24764070|gb|CA399239.1|CA399239
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5714350|gb|AI944335.1|AI944335
EST:     GATGCATTCTTGCCTGCGACCCCAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60398608|gb|DN231424.1|DN231424
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|76285559|gb|DV025127.1|DV025127
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|18177630|gb|BM378840.1|BM378840
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|76285558|gb|DV025126.1|DV025126
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|211067607|gb|FL464883.1|FL464883
EST:     GATGCATTTTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5757339|gb|AI964626.1|AI964626
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|5296191|gb|AI782871.1|AI782871
EST:     TGCATTCTTGCCTGCGACCACAGGCCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: TGCATTCTTGCCTGCGACCACAG-C-TCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60399757|gb|DN232567.1|DN232567
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|9953369|gb|BE639952.1|BE639952
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|31909407|gb|CD650903.1|CD650903
EST:     ATGCATTCTTGCCCTGCGACCCCAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: ATGCATTCTTGCC-TGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60346798|gb|DN213771.1|DN213771
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|6012425|gb|AW061862.1|AW061862
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|166616056|gb|EG230717.1|EG230717
EST:     GCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGC
genomic: GCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGC
EST: gi|60339839|gb|DN206812.1|DN206812
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|113701996|gb|EE679500.1|EE679500
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|37423391|gb|CF649423.1|CF649423
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|31349858|gb|CD434215.1|CD434215
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|14243411|gb|BG841076.2|BG841076
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60348523|gb|DN215496.1|DN215496
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|29129886|gb|CB380590.1|CB380590
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|31355702|gb|CD440059.1|CD440059
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|78104562|gb|DV522980.1|DV522980
EST:     GCATTCTTGCCTGCGACCACAGCTTCGAGAGGCCATTCCAGTAACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAA
genomic: GCATTCTTGCCTGCGACCACAGCT-CGAGAGGCCATTC-AGTA-CTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAA
EST: gi|31349512|gb|CD433869.1|CD433869
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|37375185|gb|CF624015.1|CF624015
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|60358335|gb|DN225308.1|DN225308
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
EST: gi|213191211|gb|FM191435.1|FM191435
EST:     GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCAT                         GGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG
genomic: GATGCATTCTTGCCTGCGACCACAGCTCGAGAGGCCATTCAGTACTCCATgtaagctcag ... ctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggtgattgttgagtatgtgactcttagtaacacatacttattgatctgatcgcagGGATCTGTATGCGCAGTATATTTTGCAAAGCTTGAGGCAGTAGATTGGAAGCAACTATTTATCTGGGCGTCTTGGAATGAGTGTGATTTTAATAAGTCAA
                                 atacttatt  TA-rich tract