1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtagtttcctttttccctgaacttcaacaaggcaatcgtctaataatacactgagtgcaacctgtttttattttccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG
species | Zea mays |
transcript | GRMZM2G051262_T01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CAGCTCCGTCTTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|91054949|gb|EB165367.1|EB165367
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|60395015|gb|DN227884.1|DN227884
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|149100384|gb|EE186456.2|EE186456
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|149109611|gb|EE293398.2|EE293398
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|9731913|gb|BE510665.1|BE510665
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|94477519|gb|EB706477.1|EB706477
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCTTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATTTAAGACGGEST: gi|60352444|gb|DN219417.1|DN219417
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|6538807|gb|AW224946.1|AW224946
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGEST: gi|211283929|gb|FL480867.1|FL480867
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
EST: CAGCTCCGTCCTACTTCAATAACAAGAACAAGSCGGCTGAAGGGCAATAT CTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
genomic: CAGCTCCGTCCTACTTCAATAACAAGAACAAGGCGGCTGAAGGGCAATATgtagtttcct ... tccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGG
aaggcaatcgtctaataatacactgagtgcaacctgtttttattttccggtgcagCTGAAAGACATTGGAGCATGTAACTTACTGGTGGAACTTGATCTAAGACGGCCTTACCCCTCGCGCGGGAGTGACTTGTCGACATGGGAG
gtctaat putative branch site (score: 95)
cctgtttttattttcc putative PPT
tgtttttatttt TA-rich tract