1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtcagtattgactattgacactctttcccacacccaaaataaatattgtacctgatatgagcttcatttcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACATCATATGGATGCAAAATAACAGTTGTTCCAGCAAATTGGCCTGCTTCAG
species | Zea mays |
transcript | GRMZM2G029573_T02 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|37401297|gb|CF638011.1|CF638011
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|211289805|gb|FL254555.1|FL254555
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|67018136|gb|CO446885.1|CO446885
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|211287673|gb|FL254551.1|FL254551
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: TGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|71764310|gb|DR962247.1|DR962247
genomic: TGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTG-AAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|31356811|gb|CD441168.1|CD441168
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: TGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTG-AACTTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACEST: gi|31355937|gb|CD440294.1|CD440294
genomic: TGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAAC-TTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGAC
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|6445511|gb|AW179429.1|AW179429
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACAEST: gi|211287671|gb|FL254549.1|FL254549
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
EST: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCAT GTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
genomic: CTGATTCAGAATGGGAGTTTAAGAGGGATCCGTCAAGTGAAACTTTTCATgtcagtattg ... tcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACA
tttcccacacccaaaataaatattgtacctgatatgagcttcatttcttctgtagGTGGTTGCCTACGACTTTGGTATCAAGCATAATATTTTGAGACGATTGACATCATATGGATGCAAAATAACAGTTGTTCCAGCAAATTGGCCTGCTTCAG
acctgat putative branch site (score: 4)
cttcatttcttctgt putative PPT
aaaataaatattgta TA-rich tract