1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgggcatgtgcttcttgttcatgaaaagctatttaaaagtgctcccccgccccccagatatatcactcaaatgtagctgtagagagcggggtaatttggtttattttatttacctacctacaatgggacactccaatgtagctgattcttctttccccgtgtttgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGCTTGTGCTACCTTATGTGTGACCAACCTGATGCGGCCCTCCGTGATGCAA
species | Zea mays |
transcript | GRMZM2G026767_T03 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAG TTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGCEST: gi|32944385|gb|CF049204.1|CF049204
genomic: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGgtgggcatgt ... tgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGC
EST: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAG TTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGCEST: gi|32846920|gb|CD986601.1|CD986601
genomic: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGgtgggcatgt ... tgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGC
EST: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAG TTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAAACGAAGCEST: gi|60395071|gb|DN227940.1|DN227940
genomic: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGgtgggcatgt ... tgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGC
EST: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAG TTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGC
genomic: CTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGgtgggcatgt ... tgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGC
tacaatgggacactccaatgtagctgattcttctttccccgtgtttgttgcacagTTTGTCGATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGCTTGTGCTACCTTATGTGTGACCAACCTGATGCGGCCCTCCGTGATGCAA
agctgat putative branch site (score: 4)
ttcttctttccccgtg CT-rich tract