1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgtgatcccctctccactatcacactcttggcccttgatccttattagcccaaccacaccccacacgccatcttgttgcagtatctgaacttgattctctcttttggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCACAGCTATGGATATCCCACCACCCCGTGGCCCTCTCTG
species | Zea mays |
transcript | GRMZM2G001713_T01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|6859877|gb|AW355871.1|AW355871
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|5055878|gb|AI734765.1|AI734765
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|60350441|gb|DN217414.1|DN217414
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|113701512|gb|EE679016.1|EE679016
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|110191302|gb|EC873200.1|EC873200
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|213188449|gb|FM186315.1|FM186315
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|4776420|gb|AI665423.1|AI665423
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|50338071|gb|CO533197.1|CO533197
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|6918711|gb|AW400241.1|AW400241
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|7216339|gb|AW562461.1|AW562461
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|33096061|gb|CF056055.1|CF056055
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|60350240|gb|DN217213.1|DN217213
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|6095472|gb|AW120139.1|AW120139
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGNGCATCAGCGGATTCEST: gi|78027418|gb|DV495805.1|DV495805
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|29544922|gb|CB605530.1|CB605530
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|9953067|gb|BE639650.1|BE639650
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|9953068|gb|BE639651.1|BE639651
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|37380362|gb|CF626989.1|CF626989
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|7135536|gb|AW498135.1|AW498135
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|5871297|gb|AW017768.1|AW017768
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|32803024|gb|CD955260.1|CD955260
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|4804596|gb|AI665619.2|AI665619
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|60340607|gb|DN207580.1|DN207580
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|32866018|gb|CF005700.1|CF005700
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|5929089|gb|AW056381.1|AW056381
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|32802791|gb|CD955027.1|CD955027
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|6194690|gb|AW146794.1|AW146794
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|5901453|gb|AW042553.1|AW042553
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|31406139|gb|CD484871.1|CD484871
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|37378759|gb|CF626087.1|CF626087
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|17931949|gb|BM268909.1|BM268909
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|60396479|gb|DN229348.1|DN229348
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|16925379|gb|BM078447.1|BM078447
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|78026300|gb|DV494687.1|DV494687
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|5456136|gb|AI833826.1|AI833826
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAATAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCEST: gi|78180188|gb|DV550561.1|DV550561
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
EST: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAG TACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
genomic: ACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGgtgtgatccc ... ggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTC
ccacacgccatcttgttgcagtatctgaacttgattctctcttttggttatgcagTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGATTCACAGCTATGGATATCCCACCACCCCGTGGCCCTCTCTG
acttgat putative branch site (score: 818)
ttctctcttttggtt CT-rich tract