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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtgcttgtgcttgcttctcatcgaatcattggattttgctgttcactgccgacgacgacgtaatgacgtataggtgctaatagtttgcctgccatgcatggttcaatttcctcaagGTTTTGCTGGCAGTAACAGTGTCTTCCCGATATATATCGGAGACGATAGCACCGACGAGGACGCGTTCAAG

Basic information

species Zea mays
transcript GRMZM5G840145_T02
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatgacgtataggtgctaatagtttgcctgccatgcatggttcaatttcctcaagGTTTTGCTGGCAGTAACAGTGTCTTCCCGATATATATCGGAGACGATAGCACCGACGAGGACGCGTTCAAG
             tgctaat  putative branch site (score: 2)
                                             tttcctc  putative PPT
                taatagttt  TA-rich tract