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gtaagattagttcaatcgatacttttcgcactatatttagatggctagattcaatgacgccttccaatatgcagGTATGAGCTTCACTACCAAATGATTACTTTTGGAAAG
species | Zea mays |
transcript | GRMZM2G422464_T02 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ATACAGAAGTACCTCTGGCCTCGACTATGCAAACTAGATCAACGTACATT GTATGAGCTTCACTACCAAATGATTACTTTTTGGAAAGEST: gi|31355817|gb|CD440174.1|CD440174
genomic: ATACAGAAGTACCTCTGGCCTCGACTATGCAAACTAGATCAACGTACATTgtaagattag ... caatatgcagGTATGAGCTTCACTACCAAATGATTACTTTT-GGAAAG
EST: ATACAGAAGTACCTCTGGCCTCGACTATGCAAACTAGATCAACGTACATT GTATGAGCTTCACTACCAAATGATTACTTTTGGAAAG
genomic: ATACAGAAGTACCTCTGGCCTCGACTATGCAAACTAGATCAACGTACATTgtaagattag ... caatatgcagGTATGAGCTTCACTACCAAATGATTACTTTTGGAAAG
tacttttcgcactatatttagatggctagattcaatgacgccttccaatatgcagGTATGAGCTTCACTACCAAATGATTACTTTTGGAAAG
cgccttcc CT-rich tract
tatatttagat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagattagttcaatcgatacttttcgcactatatttagatggctagattcaatgacgccttccaatatgcagGTATGAGCTTCACTACCAAATGATTACTTTTGGAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT