1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...tctaattatgggtgataatgtatgctcagtcttcagctattcctgttgcctgttgttacatctttttttaaagaaaaaactgaccttatgtgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCCTACATGATTGCACTGGCCTGCATATACATAGCGAGTGTTTTGAAAGAT
species | Zea mays |
transcript | GRMZM2G408242_T03 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|60352426|gb|DN219399.1|DN219399
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|211116530|gb|FL229719.1|FL229719
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTNGT-GCAGGATGCTGGCATAACAGACCTGACACATTTTGCCTG GGGCCTTGTTTATGATACATACCAGATGGACCEST: gi|37373889|gb|CF623269.1|CF623269
genomic: GTT-GTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|78022288|gb|DV490675.1|DV490675
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|32930869|gb|CF035681.1|CF035681
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|211117330|gb|FL229739.1|FL229739
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|78544078|gb|DV621576.1|DV621576
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|60352672|gb|DN219645.1|DN219645
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|22818772|gb|BU498862.1|BU498862
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|5325108|gb|AI783299.1|AI783299
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGNTAATGATACATACAAGATGGACCTTATCCTCATATACCCEST: gi|60346539|gb|DN213512.1|DN213512
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|5739678|gb|AI947473.1|AI947473
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|22818771|gb|BU498861.1|BU498861
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|74235410|gb|DT643324.1|DT643324
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|211115727|gb|FL229698.1|FL229698
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCGTG GGGCCTTGTTAATGATACATACAAGATGGACCTTAGTC-TCATATACCCTEST: gi|211507205|gb|FL420316.1|FL420316
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCC-TGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTA-TCCTCATATACCCT
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|50333682|gb|CO528808.1|CO528808
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|6742399|gb|AW313214.1|AW313214
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|6760625|gb|AW324724.1|AW324724
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATGCAAGATGGACCTTATCCTCATATACCCTCCEST: gi|6020447|gb|AW065375.1|AW065375
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGNTAATGATACATACAAGATGGACCTTATCCTCATATACCCEST: gi|149084617|gb|EE174095.2|EE174095
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|20301653|gb|BQ164596.1|BQ164596
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|148990759|gb|EE032170.2|EE032170
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|148990758|gb|EE032169.2|EE032169
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|26456727|gb|CA828310.1|CA828310
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|60339571|gb|DN206544.1|DN206544
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|74235409|gb|DT643323.1|DT643323
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|211160608|gb|FL453142.1|FL453142
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: ACACAATTTGCCTG GGCCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATAGCCTCCEST: gi|22521612|gb|BU080423.1|BU080423
genomic: ACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCEST: gi|22549285|gb|BU101486.1|BU101486
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCEST: gi|148937775|gb|EC881986.2|EC881986
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
EST: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTG GGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
genomic: GTTGTTGCAGGATGCTGGCATAACAGACCTGACACAATTTGCCTGgtaagcactg ... tgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCC
ttgcctgttgttacatctttttttaaagaaaaaactgaccttatgtgacttgcagGGGCCTTGTTAATGATACATACAAGATGGACCTTATCCTCATATACCCTCCCTACATGATTGCACTGGCCTGCATATACATAGCGAGTGTTTTGAAAGAT
aactgac putative branch site (score: 219)
ttgttacatctttttt TA-rich tract