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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacttcatttttgttgttgtaaacgatgcatgctatatttgatatggaattcttgctctgcaatgttaacctgttgccaagtaaatttaccaatacaatagtgtaataactttttattgattcatgtgatcatgcattgatgaatcacttacatttgccctacttcttgcagCCACTTGTATCTGGTGCGGCATTAGGCTTAGAAGGGCAG

Basic information

species Zea mays
transcript GRMZM2G157836_T03
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgattcatgtgatcatgcattgatgaatcacttacatttgccctacttcttgcagCCACTTGTATCTGGTGCGGCATTAGGCTTAGAAGGGCAG
                            cacttac  putative branch site (score: 2)
                                    tttgccctacttctt  CT-rich tract
                               ttacattt  TA-rich tract