1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaggtggggccgttttttgattaatcacgcctccatcataataatgtattgcttttttattttggccgagaacaccatgtcatgggatgcatcatgcatgcgcctttaatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTGACTTGACCGACCCTGTATCATGTAATTTGTATGCCACTCATTTGTGGT
species | Zea mays |
transcript | GRMZM2G151268_T04 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|45847355|gb|CN071298.1|CN071298
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|4647161|gb|AI622236.1|AI622236
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|32833706|gb|CD973384.1|CD973384
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|32834914|gb|CD974592.1|CD974592
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|78122445|gb|DV540829.1|DV540829
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|21432449|gb|BQ547939.1|BQ547939
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGACGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|91049337|gb|EB159755.1|EB159755
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|60359679|gb|DN226652.1|DN226652
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|32909956|gb|CF014768.1|CF014768
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|23357627|gb|BU645276.1|BU645276
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|47961828|gb|CN844537.1|CN844537
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGNGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGCGTTGCTEST: gi|26557650|gb|CA829885.1|CA829885
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTG-GTTGCT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|94478768|gb|EB707726.1|EB707726
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCCGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|60399998|gb|DN232805.1|DN232805
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|113701244|gb|EE678748.1|EE678748
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|12971760|gb|BG267644.1|BG267644
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|15323531|gb|BI478753.1|BI478753
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|21809549|gb|BQ667867.1|BQ667867
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAAATAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|211191649|gb|FL029190.1|FL029190
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|32938881|gb|CF043700.1|CF043700
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|211194039|gb|FL029192.1|FL029192
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|89106102|gb|DY576319.1|DY576319
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|60348471|gb|DN215444.1|DN215444
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTEST: gi|29945211|gb|CB815526.1|CB815526
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
EST: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAG GCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
genomic: GAAAGTGTTCAGCTAGACCGCAAATCTCGGAATCTGCCGACATCTTGGAGgtaggtgggg ... taatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTT
ttggccgagaacaccatgtcatgggatgcatcatgcatgcgcctttaatttgcagGCATTCAGGGGATGGCGCCGAGTAACAAGAAGGCTTTGGAGCTGGTTGCTTGACTTGACCGACCCTGTATCATGTAATTTGTATGCCACTCATTTGTGGT
ctttaat putative branch site (score: 4)
cgccttt CT-rich tract
tttaattt TA-rich tract