1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagacataccgacgaccttacatgtcgatgtgggttttgcatcgcattttcccatcttctcatggcttggtggggccttgctggtttaattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCGCGGGCCACCGCGCGGTGGCCGAGGGAGCTACTACTAGGCGCGAGAAAT
species | Zea mays |
transcript | GRMZM2G146472_T03 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18180551|gb|BM381761.1|BM381761
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: CCCGAGGAATATGCTCCTCCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGNCCEST: gi|18649419|gb|BM498238.1|BM498238
genomic: CCCGAGGAATATGCTCCT-CCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: GACGAATACTATGATGAGCCCGA-GAATATGCTCCTCCCCCT-GCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5152821|gb|AI759119.1|AI759119
genomic: GACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|87153663|gb|DY398452.1|DY398452
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|32866932|gb|CF006614.1|CF006614
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5124423|gb|AI746159.1|AI746159
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|89755184|gb|DY685709.1|DY685709
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|149010217|gb|EE042036.2|EE042036
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60346152|gb|DN213125.1|DN213125
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60401473|gb|DN234280.1|DN234280
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|24773580|gb|CA408834.1|CA408834
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|50334596|gb|CO529722.1|CO529722
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: GATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18384164|gb|BM417364.1|BM417364
genomic: GATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60345558|gb|DN212531.1|DN212531
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|28987021|gb|CB351425.1|CB351425
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18180244|gb|BM381454.1|BM381454
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: GAATACTATGATGAGCCCGAGGAATATTGCTCCTNNNNNNNTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|15632650|gb|BI679743.1|BI679743
genomic: GAATACTATGATGAGCCCGAGGAATA-TGCTCCT--CCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18178578|gb|BM379788.1|BM379788
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60350971|gb|DN217944.1|DN217944
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60352101|gb|DN219074.1|DN219074
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATCCTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGGGTGGGCGTGGAGGCCEST: gi|37383692|gb|CF628871.1|CF628871
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|71309709|gb|DR791133.1|DR791133
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: CGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18179173|gb|BM380383.1|BM380383
genomic: CGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: GACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCNCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5739911|gb|AI947601.1|AI947601
genomic: GACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCC-CCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCCCG GACGTGGCAGAGGGAGAAGGGCCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60399599|gb|DN232410.1|DN232410
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|24934802|gb|CA453020.1|CA453020
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCCGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5439463|gb|AI820384.1|AI820384
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60345737|gb|DN212710.1|DN212710
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60345033|gb|DN212006.1|DN212006
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60394695|gb|DN227565.1|DN227565
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60357376|gb|DN224349.1|DN224349
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18180803|gb|BM382013.1|BM382013
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: GACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCATGGCCGC- GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCEST: gi|60339803|gb|DN206776.1|DN206776
genomic: GACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCC-TGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGC
EST: GCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60396096|gb|DN228965.1|DN228965
genomic: GCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|18179781|gb|BM380991.1|BM380991
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: ACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCNCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60343821|gb|DN210794.1|DN210794
genomic: ACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCC-CCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|67033734|gb|CO462483.1|CO462483
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|14245651|gb|BG874233.1|BG874233
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: TGAGCCCGAGGAATATGCTCCTCCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGACCEST: gi|60355626|gb|DN222599.1|DN222599
genomic: TGAGCCCGAGGAATATGCTCCT-CCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|4621381|gb|AI612214.1|AI612214
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|148939816|gb|EC884518.2|EC884518
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|71756347|gb|DR954284.1|DR954284
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5608129|gb|AI901796.1|AI901796
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60398720|gb|DN231536.1|DN231536
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60338207|gb|DN205180.1|DN205180
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|29545026|gb|CB605204.1|CB605204
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60355631|gb|DN222604.1|DN222604
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60337039|gb|DN204012.1|DN204012
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|24763920|gb|CA399090.1|CA399090
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGCCGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAAAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGCCCEST: gi|18648838|gb|BM497657.1|BM497657
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60350068|gb|DN217041.1|DN217041
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|24773119|gb|CA408373.1|CA408373
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|50334595|gb|CO529721.1|CO529721
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|24773638|gb|CA408892.1|CA408892
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAAAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|15499631|gb|BI596144.1|BI596144
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGNCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|9732335|gb|BE511087.1|BE511087
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60339683|gb|DN206656.1|DN206656
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|5455921|gb|AI833611.1|AI833611
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACNGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCEST: gi|29129866|gb|CB380570.1|CB380570
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGAC-GTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCEST: gi|60356279|gb|DN223252.1|DN223252
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
EST: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCG GACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
genomic: AGACGAATACTATGATGAGCCCGAGGAATATGCTCCTCCCCCTGGCCGCGgtaagacata ... taattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCC
tcgcattttcccatcttctcatggcttggtggggccttgctggtttaattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCGCGGGCCACCGCGCGGTGGCCGAGGGAGCTACTACTAGGCGCGAGAAAT
gtttaat putative branch site (score: 641)
tttaattca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagacataccgacgaccttacatgtcgatgtgggttttgcatcgcattttcccatcttctcatggcttggtggggccttgctggtttaattcacagGACGTGGCAGAGGGAGAAGGGGCGGCATGCCTTGGCGTGGGCGTGGAGGCCGCGGGCCACCGCGCGGTGGCCGAGGGAGCTACTACTAGGCGCGAGAAAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT